Database sources for iProClass report
GENERAL INFORMATION
Protein Name and ID UniProtKB
RefSeq
GenPept
IPI
Taxonomy Source Organism: NCBI
Taxon Group: NCBI
NCBI Taxon: NCBI
Lineage: NCBI
Gene Name
Keywords UniProtKB
Function UniProtKB
Subunit UniProtKB
Tissue Specificity UniProtKB
CROSS-REFERENCES
Bibliography UniProt Entrez Gene
MGI
SGD
DNA Sequence EMBL/DDBJ
Genome/Gene HGNC; GeneCards; Ensembl; GenAtlas
MGI
RGD
Entrez Gene
UniGene
RefSeq
GDB
TIGR
GenProtEC
SGD
FlyBase
Gramene
DictyBase
EcoGene
EcoCyc
Leproma
ListiList
MaizeDB
MypuList
ZFIN
WormBase
WormPep
Gene Index
Gene Expression CleanEx; SOURCE
OUMCF
Genetic Variation/Disease HapMap
GeneTest
OMIM
Gene Regulation ERGDB
ISG
Ontology FlyBase
MGI
SGD
Enzyme/Function KEGG, BRENDA, MetaCyc
Pathway KEGG
EcoCyc
Complex/Interaction DIP
EcoCyc
BIND
Protein Expression AUN-2DPAGE
SWISS-2DPAGE
COMPLUYEAST-2DPAGE
HSC-2DPAGE
PHCI-2DPAGE
PMMA-2DPAGE
PMG
Structure PDB
Similarity:
SCOP, CATH, FSSP, MMDB, PDBsum, CSA
Modbase
PIR Feature & Post Translational Modifications FEAT
Protein Modification Phosphorylation Site DB
Other Databases REBASE
NucleaRDB
GPCRDB
FAMILY CLASSIFICATION
UniRef UniRef100_; UniRef90_; UniRef50_
PIRSF PIRSF
Pfam Domain Pfam
Prosite MotifProsite Motif
InterPro InterPro
SCOP Fold Class; Fold; Superfamily; Family SCOP
Panther Panther
Other Classification COG
CDD
BLOCKS
PRINTS
SMART
TIGRFAMs
ProDom
HAMAP
FEATURE & SEQUENCE DISPLAY